filter warning in test

Author: m-philipps

petab/v2/petab1to2.py

@@ -524,7 +524,7 @@ def update_prior(row):
     )
     # some columns were dropped in PEtab v2
     if v1.C.INITIALIZATION_PRIOR_TYPE in df and (
-        df[v1.C.INITIALIZATION_PRIOR_TYPE].notna()
+        df[v1.C.INITIALIZATION_PRIOR_TYPE].notna().any()
     ):
         warnings.warn(
             "Initialisation priors in parameter table are not supported "

tests/v2/test_conversion.py

@@ -33,6 +33,13 @@ def test_petab1to2_remote():
 @pytest.mark.filterwarnings(
     "ignore:.*Using `log-normal` instead.*:UserWarning"
 )
+@pytest.mark.filterwarnings(
+    "ignore:.*Initialisation priors in parameter table are not supported.*:"
+    "UserWarning"
+)
+@pytest.mark.filterwarnings(
+    "ignore:.*Parameter scales are not supported in PEtab v2.*:UserWarning"
+)
 @parametrize_or_skip
 def test_benchmark_collection(problem_id):
     """Test that we can upgrade all benchmark collection models."""