grphin/environment.yml at main · Reed-CompBio/grphin · GitHub

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name: grphin
channels:
  - conda-forge
  - defaults
  - https://repo.anaconda.com/pkgs/main
  - https://repo.anaconda.com/pkgs/r
dependencies:
  - blas=1.0
  - brotli=1.1.0
  - brotli-bin=1.1.0
  - brotli-python=1.0.9
  - bzip2=1.0.8
  - ca-certificates=2025.2.25
  - certifi=2025.1.31
  - cffi=1.17.1
  - charset-normalizer=3.3.2
  - contourpy=1.3.1
  - cycler=0.11.0
  - dataclasses=0.8
  - expat=2.7.1
  - fonttools=4.55.3
  - freetype=2.13.3
  - h2=4.2.0
  - hpack=4.1.0
  - hyperframe=6.1.0
  - idna=3.7
  - jpeg=9e
  - kiwisolver=1.4.8
  - lcms2=2.16
  - lerc=4.0.0
  - libblas=3.9.0
  - libbrotlicommon=1.1.0
  - libbrotlidec=1.1.0
  - libbrotlienc=1.1.0
  - libcblas=3.9.0
  - libcxx=20.1.3
  - libdeflate=1.22
  - libffi=3.4.4
  - libgfortran=5.0.0
  - libgfortran5=11.3.0
  - liblapack=3.9.0
  - liblzma=5.6.4
  - liblzma-devel=5.6.4
  - libmpdec=4.0.0
  - libopenblas=0.3.23
  - libpng=1.6.39
  - libsqlite=3.45.3
  - libtiff=4.7.0
  - libwebp-base=1.3.2
  - libzlib=1.2.13
  - llvm-openmp=14.0.6
  - lz4-c=1.9.4
  - matplotlib-base=3.10.1
  - munkres=1.1.4
  - ncurses=6.4.20240210
  - networkx=3.4.2
  - numpy=2.2.4
  - openjpeg=2.5.2
  - openssl=3.0.16
  - packaging=24.2
  - pandas=2.2.3
  - patsy=1.0.1
  - pillow=11.1.0
  - pip=25.0.1
  - pycparser=2.22
  - pyparsing=3.2.0
  - pypdf2=3.0.1
  - pysocks=1.7.1
  - python=3.13.2
  - python-dateutil=2.9.0post0
  - python-tzdata=2023.3
  - python_abi=3.13
  - pytz=2024.1
  - qhull=2020.2
  - readline=8.2
  - requests=2.32.3
  - scipy=1.15.2
  - seaborn=0.13.2
  - seaborn-base=0.13.2
  - setuptools=75.8.0
  - six=1.17.0
  - sqlite=3.45.3
  - statsmodels=0.14.4
  - tk=8.6.14
  - typing_extensions=4.12.2
  - tzdata=2025a
  - urllib3=2.3.0
  - wheel=0.45.1
  - xz=5.6.4
  - xz-gpl-tools=5.6.4
  - xz-tools=5.6.4
  - zlib=1.2.13
  - zstandard=0.23.0
  - zstd=1.5.6
  - pip:
      - asttokens==3.0.0
      - decorator==5.2.1
      - executing==2.2.0
      - ipython==9.1.0
      - ipython-pygments-lexers==1.1.1
      - jedi==0.19.2
      - jinja2==3.1.6
      - jsonpickle==4.0.5
      - markupsafe==3.0.2
      - matplotlib-inline==0.1.7
      - parso==0.8.4
      - pexpect==4.9.0
      - prompt-toolkit==3.0.51
      - ptyprocess==0.7.0
      - pure-eval==0.2.3
      - pygments==2.19.1
      - pyvis==0.3.2
      - stack-data==0.6.3
      - traitlets==5.14.3
      - wcwidth==0.2.13