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TUV-x photolysis #1471
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TUV-x photolysis #1471
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modified: .gitmodules modified: cime_config/buildlib modified: libraries/tuv-x (new commits)
jimmielin
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Thanks @fvitt - I had some minor suggested changes that are hopefully straightforward.
| call mee_ion_final() | ||
| call rate_diags_final() | ||
| call species_sums_final() | ||
| call tuvx_finalize() |
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Could maybe wrap this within if (tuvx_active) to be consistent with the other calls
| !----------------------------------------------------------------- | ||
| ! ... get calculated photolysis rates from TUV-x | ||
| !----------------------------------------------------------------- | ||
| call tuvx_get_photo_rates( state, pbuf, ncol, lchnk, zmid, zint, & |
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It looks like the only place tuvx_get_photo_rates uses state is to get state%ncol in line ~679, but ncol is already passed in here. Maybe state does not have to be passed in to call tuvx_get_photo_rates
| subroutine gas_phase_chemdr(lchnk, ncol, imozart, q, & | ||
| phis, zm, zi, calday, & | ||
| tfld, pmid, pdel, pint, rpdel, rpdeldry, & | ||
| cldw, troplev, troplevchem, & | ||
| ncldwtr, ufld, vfld, & | ||
| delt, ps, & | ||
| fsds, ts, asdir, ocnfrac, icefrac, & | ||
| precc, precl, snowhland, ghg_chem, latmapback, & | ||
| drydepflx, wetdepflx, cflx, fire_sflx, fire_ztop, nhx_nitrogen_flx, noy_nitrogen_flx, & | ||
| use_hemco, qtend, pbuf) | ||
| drydepflx, wetdepflx, cflx, fire_sflx, fire_ztop, & | ||
| nhx_nitrogen_flx, noy_nitrogen_flx, & | ||
| use_hemco, qtend, pbuf, state) |
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These changes appear to be unnecessary as state was already previously passed in as the first argument, and was moved to the last one for some reason.
| use mo_chm_diags, only : chm_diags, het_diags | ||
| use perf_mod, only : t_startf, t_stopf | ||
| use gas_wetdep_opts, only : gas_wetdep_method | ||
| use physics_types, only : physics_state |
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This line is a duplicate of line 318 and does not need to be added again
| call gas_phase_chemdr(lchnk, ncol, imozart, state%q, & | ||
| state%phis, state%zm, state%zi, calday, & | ||
| state%t, state%pmid, state%pdel, state%pint, state%rpdel, state%rpdeldry, & | ||
| cldw, tropLev, tropLevChem, ncldwtr, state%u, state%v, chem_dt, state%ps, & | ||
| fsds, cam_in%ts, cam_in%asdir, cam_in%ocnfrac, cam_in%icefrac, & | ||
| cam_out%precc, cam_out%precl, cam_in%snowhland, ghg_chem, state%latmapback, & | ||
| drydepflx, wetdepflx, cam_in%cflx, cam_in%fireflx, cam_in%fireztop, & | ||
| nhx_nitrogen_flx, noy_nitrogen_flx, use_hemco, ptend%q, pbuf ) | ||
| nhx_nitrogen_flx, noy_nitrogen_flx, use_hemco, ptend%q, pbuf, state ) |
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These changes appear to be unnecessary as state was already previously passed in as the first argument, and was moved to the last one for some reason.
| integer, parameter :: PROFILE_INDEX_SO2 = 7 ! Sulfur dioxide profile index | ||
| integer, parameter :: PROFILE_INDEX_NO2 = 8 ! Nitrogen dioxide profile index |
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These appear to be non-public and unused, can I ask if these are intended to be not implemented?
| ! Definition of the MS93 wavelength grid TODO add description of this | ||
| integer, parameter :: NUM_BINS_MS93 = 4 | ||
| real(kind=r8), parameter :: WAVELENGTH_EDGES_MS93(NUM_BINS_MS93+1) = & | ||
| (/ 181.6_r8, 183.1_r8, 184.6_r8, 190.2_r8, 192.5_r8 /) |
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Missed TODO here about the description here
| deallocate( cam_grids ) | ||
| deallocate( cam_profiles ) | ||
| deallocate( cam_radiators ) | ||
| deallocate( wavelength ) |
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Since wavelength => cam_grids%get_grid(...) I would suggest switching the deallocate order for safety
| deallocate( cam_grids ) | |
| deallocate( cam_profiles ) | |
| deallocate( cam_radiators ) | |
| deallocate( wavelength ) | |
| deallocate( wavelength ) | |
| deallocate( cam_grids ) | |
| deallocate( cam_profiles ) | |
| deallocate( cam_radiators ) |
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| host_profile => profiles%get_profile( "temperature", "K" ) | ||
| this%profiles_( PROFILE_INDEX_TEMPERATURE ) = this%core_%get_updater( host_profile, found ) | ||
| call assert( 418735162, found ) |
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Here and throughout the file, there are many calls to musica_assert::assert with seemingly random numbers for unique error codes. It seems to be consistent with what's done elsewhere in MUSICA, but I would request to at least have a comment somewhere that these numbers are just unique error codes and don't have any particular meaning other than being unique, and this is how the MUSICA library handles errors. Thanks!
| ! || || | ||
| ! || | ||
| ! ----------------- i_int = pver | ||
| ! ================= i_imd = pver ------------------ i_int = 2 |
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typo here:
| ! ================= i_imd = pver ------------------ i_int = 2 | |
| ! ================= i_mid = pver ------------------ i_int = 2 |
This provides the option to use the TUV-x library to compute photo-chemical rates in-line as an alternative to the traditional table look up method.
Closes #757