Refactor project file structure#941
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except for index-specific settings, which have always been treated separately and were already in the new fairdatapoint.index package
and rename database.rdf.repository.MetadataRepository to metadata.MetadataRdfRepository and same for corresponding MetadataRepositoryException to remove ambiguity with respect to database.mongo.repository.MetadataRepository
and adapt src/main/resources accordingly rename MigrationRunner to DevelopmentMigrationRunner to be consistent with RdfDevelopmentMigrationRunner rename MongoConfig to MongoDbMigrationConfig and rename RdfRepositoryMigrationConfig to TripleStoreMigrationConfig, for clarity and consistency
and rename RepositoryProperties classes to RdfRepositoryProperties for clarity
resource loader looks for resources relative to class path, so the file structure in java and resources must match
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the big shuffle
fixes #856