1.3.0

Refactored to have everything live in a top level Python library! Exposing some getter methods from the SampleRegistry object for programmatic access.

What's Changed

• Add get_run method to SampleRegistry by @Ulthran in #49
• Refactor: integrate Flask app into top-level package by @Ulthran in #50
• Bump docker/build-push-action from 5 to 6 by @dependabot[bot] in #51
• Bump codecov/codecov-action from 4 to 5 by @dependabot[bot] in #53
• Bump actions/checkout from 4 to 5 by @dependabot[bot] in #52
• Bump actions/setup-python from 5 to 6 by @dependabot[bot] in #54

New Contributors

• @dependabot[bot] made their first contribution in #51

Full Changelog: 1.2.3...1.3.0

1.2.3

What's Changed

• Use imported machine type list by @Ulthran in #48

Full Changelog: 1.2.2...1.2.3

1.2.2

Full Changelog: 1.2.1...1.2.2

1.2.1

What's Changed

• Switch to seqBackup logic by @Ulthran in #46

Full Changelog: 1.2.0...1.2.1

1.2.0

Important bug fix for exporting large data sets

What's Changed

• Fix export bug by @Ulthran in #44

Full Changelog: 1.1.0...1.2.0

1.1.0

Adapt app configuration to work easily with any backend database.

What's Changed

• Require db be empty to create test db by @Ulthran in #41
• Switch to single spec for db URI by @Ulthran in #42

Full Changelog: 1.0.5...1.1.0

1.0.5

Add NextSeq as an option

What's Changed

• Update favicon by @Ulthran in #35
• Add NextSeq to registry machine types by @naomiwilson in #36

New Contributors

• @naomiwilson made their first contribution in #36

Full Changelog: 1.0.4...1.0.5

1.0.4

Download properly formatted tsv or QIIME-format txt files for any run.

What's Changed

• 31 fix export tsv by @Ulthran in #32

Full Changelog: 1.0.3...1.0.4

1.0.3 - Manually increment indexes

What's Changed

• Manually increment runs and samples by @Ulthran in #29

Full Changelog: 1.0.2...1.0.3

1.0.2 - Fix DockerHub credentials

Full Changelog: 1.0.1...1.0.2