Handle self-loops in SPQR tree output#6
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Pull request overview
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Adds explicit handling for self-loop edges when emitting SPQR/BC-tree graph representations, plus fixtures and ignore rules for generated outputs.
Changes:
- Add a GFA fixture graph containing several self-loops to exercise the behavior.
- Deduplicate and manually emit self-loop edges in SPQR/BC-tree output paths.
- Ignore generated
*.spqrartifacts in Git.
Reviewed changes
Copilot reviewed 2 out of 3 changed files in this pull request and generated 6 comments.
| File | Description |
|---|---|
test_graphs/self_loops.gfa |
Adds a self-loop-heavy test fixture graph. |
src/main.cpp |
Implements self-loop deduplication and manual emission in decomposition outputs. |
.gitignore |
Ignores generated .spqr output files. |
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