pbj_user_pipeline

PbjStarter.piper

This piper file will perform initial steps required for running a ctakes-pbj pipeline.

This piper file will start the Apache Artemis broker pointed to by the -a parameter on the command line. It will pause for 5 seconds to allow Artemis to fully launch.

This piper file will then pip the python package requirements for ctakes-pbj in an environment pointed to by the -v parameter on the command line.

To skip the step of running a pip of ctakes-pbj, set —pipPbj to “no”

Set the command line parameter -a to accept the directory of the Artemis broker.

cli ArtemisBroker=a

Set the command line parameter -v to accept the directory of the Python environment.

cli VirtualEnv=v

Set the command line parameter --pipPbj to 'no' to avoid a pip of pbj at the beginning of the run.

cli PipPbj=pipPbj

Write nice big banners when ctakes starts and finishes.

set WriteBanner=yes

Start the Artemis broker and pause 5 seconds. Important: You must create an Artemis Broker before running. See "Creating a Broker Instance" ADD LINK HERE The ArtemisBroker must point to the directory of the broker that you create.

add ArtemisStarter Pause=5

pip the dependency packages in case your environment doesn't have them or needs an update.

add PbjPipper

Add the Finished Logger for some run statistics.

addLast util.log.FinishedLogger

Force a stop, just in case some external process is trying to stay connected.

addLast ExitForcer Pause=3

PbjStopper.piper

Piper file that will perform final steps required for stopping a ctakes-pbj pipeline. Will stop the Apache Artemis broker pointed to by the -a parameter on the command line.

Set the command line parameter -a to accept the directory of the Artemis installation.

cli ArtemisBroker=a

Stop the Artemis Broker

add ArtemisStopper

Add the Finished Logger for some run stats

add until.log.FinishedLogger

Force a stop, just in case for some external process is trying to stay connected.

addLast ExitForcer Pause=3