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Alignment, consolidation, and error updates - #6

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rboiteau wants to merge 3 commits into
deweycw:mainfrom
rboiteau:error_update
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Alignment, consolidation, and error updates#6
rboiteau wants to merge 3 commits into
deweycw:mainfrom
rboiteau:error_update

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@rboiteau

@rboiteau rboiteau commented Jun 6, 2025

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Updates:

  • Alignment function 'run' now uses concatenated Pandas dataframe for faster alignment. Previous function is now 'run legacy', which can be used by setting 'coremstools.parameter.alignment_legacy' to true.
  • Consolidation function now has 'min_samples' parameter, that specifies the minimum value in 'N Samples' for a primary candidate of a consolidated group.
  • Consolidation_width moved to 'coremstools.parameters.consolidation_width'
  • Added function 'load_feature_list'

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