d-flex flex-column width-full">

add pr-comment.yml to prettier ignore

4e975c1

Select commit

Loading

Failed to load commit list.

Uh oh!

There was an error while loading. Please reload this page.

Sign in for the full log view

Create a pipeline and test it on: pull_request

RunTestWorkflow (25.10.4)

RunTestWorkflow (latest-everything)

Lint tools code formatting on: pull_request

pre-commit

Create a pipeline and run nf-core linting on: pull_request

MakeTestWorkflow (25.10.4)

MakeTestWorkflow (latest-everything)

Python tests on: pull_request 5

Get test file matrix

Run test_datasets/test_test_datasets_search.py with Python 3.10 and Nextflow 25.10.4

Run test_datasets/test_test_datasets_utils.py with Python 3.10 and Nextflow 25.10.4

Run test_cli.py with Python 3.10 and Nextflow 25.10.4

Run test_components.py with Python 3.10 and Nextflow 25.10.4

Run test_lint_utils.py with Python 3.10 and Nextflow 25.10.4

Run test_test_utils.py with Python 3.10 and Nextflow 25.10.4

Run test_modules.py with Python 3.10 and Nextflow 25.10.4

Run modules/test_modules_json.py with Python 3.10 and Nextflow 25.10.4

Run modules/test_bump_versions.py with Python 3.10 and Nextflow 25.10.4

Run modules/test_list.py with Python 3.10 and Nextflow 25.10.4

Run modules/test_update.py with Python 3.10 and Nextflow 25.10.4

Run modules/test_modules_utils.py with Python 3.10 and Nextflow 25.10.4

Run modules/test_create.py with Python 3.10 and Nextflow 25.10.4

Run modules/test_patch.py with Python 3.10 and Nextflow 25.10.4

Run modules/test_info.py with Python 3.10 and Nextflow 25.10.4

Run modules/test_install.py with Python 3.10 and Nextflow 25.10.4

Run modules/test_remove.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_module_todos.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_module_deprecations.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_lint_utils.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_module_changes.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_meta_yml.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_module_lint_local.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_module_version.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_module_lint_integration.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_module_tests.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_main_nf.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_module_lint_remotes.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_patch.py with Python 3.10 and Nextflow 25.10.4

Run modules/lint/test_environment_yml.py with Python 3.10 and Nextflow 25.10.4

Run components/test_completion.py with Python 3.10 and Nextflow 25.10.4

Run components/test_components_snapshot_test.py with Python 3.10 and Nextflow 25.10.4

Run components/test_components_generate_snapshot.py with Python 3.10 and Nextflow 25.10.4

Run components/test_components_utils.py with Python 3.10 and Nextflow 25.10.4

Run test_utils.py with Python 3.10 and Nextflow 25.10.4

Run test_pipelines.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_refgenie.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/download/test_container.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/download/test_docker.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/download/test_download.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/download/test_utils.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/download/test_singularity.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_create_logo.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_lint.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_list.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_completion.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_launch.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_bump_version.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_params_file.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_rocrate.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_create.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_sync.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_create_app.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_container_configs.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/test_schema.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_files_exist.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_nf_test_content.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_configs.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_modules_json.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_actions_awsfulltest.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_nfcore_yml.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_merge_markers.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_version_consistency.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_actions_schema_validation.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_actions_awstest.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_plugin_includes.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_nextflow_config.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_files_unchanged.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_template_strings.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_local_component_structure.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_rocrate_readme_sync.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_if_empty_null.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_container_configs.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_actions_nf_test.py with Python 3.10 and Nextflow 25.10.4

Run pipelines/lint/test_multiqc_config.py with Python 3.10 and Nextflow 25.10.4

Run test_subworkflows.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_list.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_update.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_create.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_patch.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_info.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_install.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/test_remove.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/lint/test_integration.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/lint/test_nf_test.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/lint/test_local.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/lint/test_main_nf.py with Python 3.10 and Nextflow 25.10.4

Run subworkflows/lint/test_patch.py with Python 3.10 and Nextflow 25.10.4

Create a pipeline from a template and test it on: pull_request

Retrieve all template features

RunTestWorkflow (github_badges)

RunTestWorkflow (changelog)

RunTestWorkflow (license)

RunTestWorkflow (ci)

RunTestWorkflow (nf-test)

RunTestWorkflow (igenomes)

RunTestWorkflow (modules)

RunTestWorkflow (multiqc)

RunTestWorkflow (fastqc)

RunTestWorkflow (nf_schema)

RunTestWorkflow (nf_core_configs)

RunTestWorkflow (seqera_platform)

RunTestWorkflow (gpu)

RunTestWorkflow (codespaces)

RunTestWorkflow (vscode)

RunTestWorkflow (code_linters)

RunTestWorkflow (citations)

RunTestWorkflow (documentation)

RunTestWorkflow (rocrate)

RunTestWorkflow (email)

RunTestWorkflow (all)

Graphite App

Graphite / mergeability_check

Codecov

codecov/project

RunTestWorkflow (latest-everything)

succeeded Jun 24, 2026 in 1m 42s

Loading

Re-running jobs...