[feat]: compatability of `r4ss::ss_output` object into `convert_output`#288

Open

Schiano-NOAA wants to merge 18 commits into

mainfrom

Commits on Jul 1, 2026

add area for condition when r4ss output object is input
Schiano-NOAA
committed
add modules to add into conout
Schiano-NOAA
committed
manipulate where te r4ss conversion goes; use current available code to apply similar logic
Schiano-NOAA
committed
add more labels for categorization
Schiano-NOAA
committed
categorize naming from r4ss::ss_output in same convention as report.sso approach
Schiano-NOAA
committed
Add specific conditions in module groupings for approaching initial df before manipulation; add missing grouping to keep consistent bewteen r4ss and report file
Schiano-NOAA
committed
replace case_when with if statements in parts of converter per suggestion from dplyr:
Schiano-NOAA
committed
add condition to id r4ss dat arg
Schiano-NOAA
committed
Revert "replace case_when with if statements in parts of converter per suggestion from dplyr:"
Schiano-NOAA
committed
add final changes to std to address issue with missing sex value
Schiano-NOAA
committed
ignore module names in ss3 sheet in favor of those in r4ss
Schiano-NOAA
committed
add a test for running r4ss through convert_output
Schiano-NOAA
committed

Commits on Jul 6, 2026

add conditions to aa plots to allow user to select module
Schiano-NOAA
committed