Repositories list

• idc-comppath-reproducibility

  Public
  Classification of lung tumor slide images with the NCI Imaging Data Commons

  machine-learningartificial-intelligencecloud-computing+ 3reproducibilityfair-datacomputational-pathology

  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •0•2•0•0•Updated Jan 7, 2026Jan 7, 2026

• idc-index-data

  Public
  Python package providing the index to query and download data hosted by the NCI Imaging Data Commons

  Python

  •

  MIT License

  •4•1•5•0•Updated Jan 6, 2026Jan 6, 2026

• s5cmd-python-distributions

  Public
  This project provides the infrastructure to build s5cmd Python wheels.

  Python

  •

  MIT License

  •1•5•0•0•Updated Jan 6, 2026Jan 6, 2026

• idc-index

  Public
  Python package to simplify access to the data available from NCI Imaging Data Commons

  Python

  •

  MIT License

  •9•18•30•3•Updated Jan 5, 2026Jan 5, 2026

• IDC-API

  Public
  Google Endpoints API providing programmatic access (CORE REPO)

  core-repo

  Python

  •

  Apache License 2.0

  •3•0•3•1•Updated Jan 2, 2026Jan 2, 2026

• slim

  Public
  Interoperable web-based DICOM slide microscopy viewer and annotation tool

  reactoidcdicomweb+ 2digital-pathologyidc-viewers

  TypeScript

  •

  Apache License 2.0

  •44•154•69•2•Updated Dec 30, 2025Dec 30, 2025

• dicom-microscopy-viewer

  Public
  Web-based DICOM slide microscopy viewer library

  javascriptnpmdicom+ 4openlayersdicomwebdicom-jsonidc-viewers

  JavaScript

  •

  MIT License

  •44•115•11•6•Updated Dec 29, 2025Dec 29, 2025

• highdicom

  Public
  High-level DICOM abstractions for the Python programming language

  numpydicompython3+ 2pydicomtypehints

  Python

  •

  MIT License

  •48•217•26•5•Updated Dec 27, 2025Dec 27, 2025

• IDC-WebApp

  Public
  Web Application front end for IDC (CORE REPO)

  core-repo

  JavaScript

  •

  Apache License 2.0

  •10•6•106•0•Updated Dec 20, 2025Dec 20, 2025

• IDC-Common

  Public
  Shared code between repositories (CORE REPO)

  core-repo

  Python

  •

  Apache License 2.0

  •5•0•0•0•Updated Dec 20, 2025Dec 20, 2025

• segmentation-comparison

  Public
  Python

  •

  Apache License 2.0

  •1•1•1•0•Updated Dec 19, 2025Dec 19, 2025

• idc-slim

  Public
  Interoperable slide microscopy viewer for thin clients (CORE REPO)

  core-repoidc-viewers

  TypeScript

  •

  Apache License 2.0

  •0•0•2•0•Updated Dec 18, 2025Dec 18, 2025

• SlicerIDCBrowser

  Public
  A 3D Slicer extension to support access to the content of NCI Imaging Data Commons

  3d-slicer-extension

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •6•7•17•3•Updated Dec 15, 2025Dec 15, 2025

• idc-downloader

  Public
  C++

  •

  Other

  •1•0•1•0•Updated Dec 15, 2025Dec 15, 2025

• CrossSegmentationExplorer

  Public
  Tools for comparing the results of AI segmentation.

  Python

  •

  Apache License 2.0

  •0•0•2•1•Updated Dec 10, 2025Dec 10, 2025

• aws_etl

  Public
  Code to transfer IDC image files from Google Cloud Storage to AWS S3 (CORE REPO)

  core-repo

  Python

  •

  Apache License 2.0

  •0•0•1•1•Updated Dec 8, 2025Dec 8, 2025

• conversion_mirax_dicom

  Public
  Code for the conversion of BMDeep dataset in MRXS format to DICOM format

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Dec 3, 2025Dec 3, 2025

• etl_flow

  Public
  (CORE REPO)

  core-repo

  Python

  •

  Apache License 2.0

  •3•4•6•0•Updated Dec 2, 2025Dec 2, 2025

• Viewers

  Public
  OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages (CORE REPO)

  core-repoidc-viewers

  JavaScript

  •

  MIT License

  •4.1k•2•4•9•Updated Nov 26, 2025Nov 26, 2025

• IDC-Docs

  Public
  Source for IDC documentation

  BSD 3-Clause "New" or "Revised" License

  •3•5•7•1•Updated Nov 26, 2025Nov 26, 2025

• .github

  Public
  MIT License

  •0•0•0•0•Updated Nov 25, 2025Nov 25, 2025

• ViewersV3

  Public
  OHIF zero-footprint DICOM viewer tracking V3 (CORE REPO)

  core-repoidc-viewers

  TypeScript

  •

  MIT License

  •4.1k•1•3•0•Updated Nov 24, 2025Nov 24, 2025

• ThrottleProxy

  Public
  (CORE REPO)

  core-repo

  Python

  •

  Apache License 2.0

  •0•2•4•0•Updated Nov 24, 2025Nov 24, 2025

• libdicom

  Public
  C library for reading DICOM files

  cdicommedical-imaging

  C

  •

  MIT License

  •11•31•2•0•Updated Nov 20, 2025Nov 20, 2025

• dicomweb-client

  Public
  Python client for DICOMweb RESTful services

  numpydicompython3+ 5pytestpython-requestsdicomwebpydicomtypehints

  Python

  •

  MIT License

  •41•125•11•5•Updated Nov 13, 2025Nov 13, 2025

• idc-sm-annotations-conversion

  Public
  conversiondicompathomics

  Python

  •

  MIT License

  •1•0•0•0•Updated Nov 12, 2025Nov 12, 2025

• IDC-Tutorials

  Public
  Self-guided notebook tutorials to help get started with IDC

  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •18•42•16•7•Updated Oct 29, 2025Oct 29, 2025

• IDC-Cron

  Public
  Cron jobs run for IDC monitoring (CORE REPO)

  core-repo

  Python

  •

  Apache License 2.0

  •0•0•0•1•Updated Oct 22, 2025Oct 22, 2025

• download

  Public
  Browser-based code for accessing IDC data resources

  HTML

  •

  Apache License 2.0

  •0•1•5•0•Updated Oct 22, 2025Oct 22, 2025

• idc-viewers-sandbox-gha-testing

  Public
  MIT License

  •1•1•0•0•Updated Oct 15, 2025Oct 15, 2025